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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922161.1_cds_XP_016470943.1_63343
CDS Infomation

[gene=LOC107793171] [db_xref=GeneID:107793171] [protein=type-2 histone deacetylase 2-like isoform X3] [protein_id=XP_016470943.1] [location=complement(join(141932..142216,142445..142636,143524..144333))] [gbkey=CDS]
Sequence

ATGTCGAGCCCTCTCAGTGATCAAATTCTGAATTTCTGTGAGTCTGAGTTGTTTCCAAAT
GTACAGAATTCAGAAGTTGCTTCTAGCTCAAATTGTTGCAGCTATGAGGAACAGAGTTCA
TATTCAACCAATCTTGACATGAACAAATTCAATAACACTATTGAGAAGAATGAAGAAACC
AACATCACCACAGTTACATCTAATATTAGCCCTTCACGAACCAACAACAACAACAACAAC
AACAACAACGACAACAACAACATTAACAACAACGCTCTCTCAATAATATTTGATTCTCAA
GAAGATCAAATTGAGAATGATATTTCAGCTTCAATTGAGTTCACACAAGACGCGAACTTC
TCAATCCCTCATCATTTACTTAATCCTCAACAAGAACTATTCGACATTAATTCTCTCAAC
AATCAACATATCAAAGTAACCGATGTTTCTCAGTATCCTCCTGATCATCCTCCACCTATT
GTTCCACTTATGGGACCTCCATTAGGACATATATATGAAGACGAATCTTTGTCATCAGTT
CCTTCTTACATGCGCGTTCCTACTACTTCTTCTTCTCCTTCTTGTCCTCTTCTTGATCCT
ACGCTCGCAAACTACTTACCTTTAAACTCAAATCCCACCATGCCTGTTGCTGAATCTTCA
GCAATACTTGCTGCTGCCACTACAGGAGGTGGCTTGTTTTTCGGTGCTGAGTTTCCACAA
GTACAAGAATTGGAATATCAAGGAGACAATGGTAGATTATTCTGCCCTGATGCCTTGCCA
AGAGTTTATAACTGCTCTAATGAGCTTCAGGCACTCAGCAATGAGAGTCAACATTTGGTT
AGTGCTACCGGATGTTCTAACCCGTTGGCATCAGATATAACAAATTTGGATGATCCTTCC
TTCAGTAATAATGTTGTCAAATGCTCTCCTGAGGAGAGGAGGGAGAAGATTAATAGATAC
ATGAAGAAACGAAACGAAAGGAATTTCAGCAAGAAAATCAAGTATGCATGCAGGAAAACA
TTAGCAGACAGTAGGCCAAGGGTGAGAGGAAGATTTGCAAAGAATGATGAATTTGGGGAA
GCTAATAAGACAACTTCTTGTGGTACACATGAAGATGACACAAAAGAAGATGTAAAACTC
AATCATTTATACCATCATGATCCTAATATGATTACTTCTTCAGGACATGATAATAATGGT
CGGATTTTCACTTCCAATTGCCACTCATCTAACAGTCCTTATGATATTTGCCCCCCTCTG
TATTGCACAGATGGCCAGTTGCACTAA

Peptide Sequence

PEP ID

XP_016470943.1
PEP Infomation

PREDICTED: type-2 histone deacetylase 2-like isoform X3 [Nicotiana tabacum]
Sequence

MSSPLSDQILNFCESELFPNVQNSEVASSSNCCSYEEQSSYSTNLDMNKFNNTIEKNEET
NITTVTSNISPSRTNNNNNNNNNDNNNINNNALSIIFDSQEDQIENDISASIEFTQDANF
SIPHHLLNPQQELFDINSLNNQHIKVTDVSQYPPDHPPPIVPLMGPPLGHIYEDESLSSV
PSYMRVPTTSSSPSCPLLDPTLANYLPLNSNPTMPVAESSAILAAATTGGGLFFGAEFPQ
VQELEYQGDNGRLFCPDALPRVYNCSNELQALSNESQHLVSATGCSNPLASDITNLDDPS
FSNNVVKCSPEERREKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGE
ANKTTSCGTHEDDTKEDVKLNHLYHHDPNMITSSGHDNNGRIFTSNCHSSNSPYDICPPL
YCTDGQLH

Transcript Sequence

Gene sequence data has not been registered.